Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ClpbQ60649 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ClpbQ60649 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.67□□□□□ -0.22
ClpbQ60649 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
ClpbQ60649 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.67□□□□□ -0.22
ClpbQ60649 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.67□□□□□ -0.22
ClpbQ60649 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Gm18049-201ENSMUST00000208909 581 ntBASIC13.67□□□□□ -0.22
ClpbQ60649 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.67□□□□□ -0.22
ClpbQ60649 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ClpbQ60649 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ClpbQ60649 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ClpbQ60649 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.67□□□□□ -0.22
ClpbQ60649 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.67□□□□□ -0.22
ClpbQ60649 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.66□□□□□ -0.22
ClpbQ60649 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.66□□□□□ -0.22
ClpbQ60649 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
ClpbQ60649 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClpbQ60649 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClpbQ60649 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClpbQ60649 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClpbQ60649 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClpbQ60649 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ClpbQ60649 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ClpbQ60649 Gm5479-201ENSMUST00000160578 435 ntBASIC13.66□□□□□ -0.22
ClpbQ60649 AA543401-201ENSMUST00000164248 1269 ntBASIC13.66□□□□□ -0.22
ClpbQ60649 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ClpbQ60649 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.66□□□□□ -0.22
ClpbQ60649 Gm5779-201ENSMUST00000218467 910 ntBASIC13.66□□□□□ -0.22
ClpbQ60649 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClpbQ60649 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClpbQ60649 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ClpbQ60649 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
ClpbQ60649 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClpbQ60649 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ClpbQ60649 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClpbQ60649 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClpbQ60649 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ClpbQ60649 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ClpbQ60649 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClpbQ60649 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClpbQ60649 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClpbQ60649 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ClpbQ60649 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.65□□□□□ -0.22
ClpbQ60649 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ClpbQ60649 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ClpbQ60649 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
ClpbQ60649 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.65□□□□□ -0.22
ClpbQ60649 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.65□□□□□ -0.22
ClpbQ60649 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.65□□□□□ -0.22
ClpbQ60649 Gm45098-201ENSMUST00000207179 657 ntBASIC13.65□□□□□ -0.22
ClpbQ60649 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ClpbQ60649 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.65□□□□□ -0.22
ClpbQ60649 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
ClpbQ60649 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ClpbQ60649 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ClpbQ60649 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
ClpbQ60649 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClpbQ60649 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.23
ClpbQ60649 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
ClpbQ60649 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms