Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 BC001981-202ENSMUST00000191393 1545 ntBASIC15.13■□□□□ 0.01
Shroom1Q5SX79 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Shroom1Q5SX79 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Gm12490-201ENSMUST00000120255 560 ntBASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shroom1Q5SX79 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Gm10275-202ENSMUST00000168697 495 ntBASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Gm7653-201ENSMUST00000214567 508 ntBASIC15.11■□□□□ 0.01
Shroom1Q5SX79 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Gm10275-201ENSMUST00000092620 635 ntBASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Shroom1Q5SX79 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.1■□□□□ 0.01
Shroom1Q5SX79 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shroom1Q5SX79 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shroom1Q5SX79 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms