Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Gm25406-201ENSMUST00000157599 105 ntBASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Gm9172-201ENSMUST00000212092 954 ntBASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav3-3Q5R1C3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms