Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Gm37714-201ENSMUST00000194742 342 ntBASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rc3h1Q4VGL6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Gm23984-201ENSMUST00000157139 203 ntBASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Gm9794-201ENSMUST00000202370 423 ntBASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Gm7653-201ENSMUST00000214567 508 ntBASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Gm5186-201ENSMUST00000218781 920 ntBASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Gm6180-201ENSMUST00000065243 498 ntBASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rc3h1Q4VGL6 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Gm12490-201ENSMUST00000120255 560 ntBASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Gm28631-201ENSMUST00000190740 334 ntBASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms