Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Gm37714-201ENSMUST00000194742 342 ntBASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ckap2Q3V1H1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Gm33320-201ENSMUST00000192232 530 ntBASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Gm44872-201ENSMUST00000207864 420 ntBASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Gm7775-201ENSMUST00000218871 853 ntBASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Gm9063-201ENSMUST00000223299 582 ntBASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ckap2Q3V1H1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Gm15460-201ENSMUST00000118147 391 ntBASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Gm18027-201ENSMUST00000218947 619 ntBASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ckap2Q3V1H1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ckap2Q3V1H1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms