Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.98□□□□□ -0.01
Nlrc4Q3UP24 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nlrc4Q3UP24 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Gm25925-201ENSMUST00000158314 306 ntBASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Gm27989-201ENSMUST00000184721 107 ntBASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Gm10576-201ENSMUST00000191927 825 ntBASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Gm44608-201ENSMUST00000206827 855 ntBASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nlrc4Q3UP24 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.96□□□□□ -0.02
Nlrc4Q3UP24 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Nlrc4Q3UP24 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nlrc4Q3UP24 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nlrc4Q3UP24 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nlrc4Q3UP24 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nlrc4Q3UP24 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nlrc4Q3UP24 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nlrc4Q3UP24 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms