Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fndc4Q3TR08 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Fndc4Q3TR08 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Fndc4Q3TR08 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Fndc4Q3TR08 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Fndc4Q3TR08 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Fndc4Q3TR08 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.47
Fndc4Q3TR08 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Fndc4Q3TR08 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Fndc4Q3TR08 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Fndc4Q3TR08 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fndc4Q3TR08 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Gm18206-201ENSMUST00000207027 926 ntBASIC12.13□□□□□ -0.47
Fndc4Q3TR08 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms