Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm15467-201ENSMUST00000120582 445 ntBASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim43aQ3TL54 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
Trim43aQ3TL54 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trim43aQ3TL54 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim43aQ3TL54 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trim43aQ3TL54 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim43aQ3TL54 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43aQ3TL54 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim43aQ3TL54 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.08■□□□□ 0
Trim43aQ3TL54 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim43aQ3TL54 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43aQ3TL54 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.08■□□□□ 0
Trim43aQ3TL54 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim43aQ3TL54 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.08■□□□□ 0
Trim43aQ3TL54 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.08■□□□□ 0
Trim43aQ3TL54 Gm9727-201ENSMUST00000161387 555 ntBASIC15.08■□□□□ 0
Trim43aQ3TL54 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.08■□□□□ 0
Trim43aQ3TL54 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim43aQ3TL54 Gm37935-201ENSMUST00000192012 982 ntBASIC15.08■□□□□ 0
Trim43aQ3TL54 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.08■□□□□ 0
Trim43aQ3TL54 Gm45098-201ENSMUST00000207179 657 ntBASIC15.08■□□□□ 0
Trim43aQ3TL54 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.08■□□□□ 0
Trim43aQ3TL54 Gm45747-201ENSMUST00000212203 999 ntBASIC15.08■□□□□ 0
Trim43aQ3TL54 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.08■□□□□ 0
Trim43aQ3TL54 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim43aQ3TL54 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43aQ3TL54 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43aQ3TL54 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43aQ3TL54 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43aQ3TL54 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.08■□□□□ 0
Trim43aQ3TL54 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43aQ3TL54 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Trim43aQ3TL54 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43aQ3TL54 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43aQ3TL54 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.08■□□□□ 0
Trim43aQ3TL54 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim43aQ3TL54 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trim43aQ3TL54 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43aQ3TL54 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43aQ3TL54 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43aQ3TL54 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43aQ3TL54 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim43aQ3TL54 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim43aQ3TL54 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim43aQ3TL54 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.07■□□□□ 0
Trim43aQ3TL54 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.07■□□□□ 0
Trim43aQ3TL54 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.07■□□□□ 0
Trim43aQ3TL54 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43aQ3TL54 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trim43aQ3TL54 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim43aQ3TL54 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43aQ3TL54 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43aQ3TL54 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Trim43aQ3TL54 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trim43aQ3TL54 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.06■□□□□ 0
Trim43aQ3TL54 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trim43aQ3TL54 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trim43aQ3TL54 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trim43aQ3TL54 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Trim43aQ3TL54 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.06■□□□□ 0
Trim43aQ3TL54 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms