Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Gm29707-201ENSMUST00000196325 491 ntBASIC11.71□□□□□ -0.53
Trim63Q38HM4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim63Q38HM4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11.71□□□□□ -0.53
Trim63Q38HM4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim63Q38HM4 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim63Q38HM4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim63Q38HM4 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim63Q38HM4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.71□□□□□ -0.54
Trim63Q38HM4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trim63Q38HM4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim63Q38HM4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim63Q38HM4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim63Q38HM4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trim63Q38HM4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim63Q38HM4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim63Q38HM4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Gm2559-201ENSMUST00000201323 363 ntBASIC11.7□□□□□ -0.54
Trim63Q38HM4 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.7□□□□□ -0.54
Trim63Q38HM4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.7□□□□□ -0.54
Trim63Q38HM4 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim63Q38HM4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.69□□□□□ -0.54
Trim63Q38HM4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Trim63Q38HM4 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.69□□□□□ -0.54
Trim63Q38HM4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim63Q38HM4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms