Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.68■□□□□ 0.42
Col1a2Q01149 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.68■□□□□ 0.42
Col1a2Q01149 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Col1a2Q01149 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.68■□□□□ 0.42
Col1a2Q01149 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.68■□□□□ 0.42
Col1a2Q01149 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Col1a2Q01149 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.68■□□□□ 0.42
Col1a2Q01149 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.68■□□□□ 0.42
Col1a2Q01149 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.68■□□□□ 0.42
Col1a2Q01149 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col1a2Q01149 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col1a2Q01149 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col1a2Q01149 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col1a2Q01149 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.67■□□□□ 0.42
Col1a2Q01149 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.67■□□□□ 0.42
Col1a2Q01149 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.67■□□□□ 0.42
Col1a2Q01149 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col1a2Q01149 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Col1a2Q01149 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col1a2Q01149 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col1a2Q01149 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col1a2Q01149 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.67■□□□□ 0.42
Col1a2Q01149 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col1a2Q01149 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Col1a2Q01149 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.67■□□□□ 0.42
Col1a2Q01149 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col1a2Q01149 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col1a2Q01149 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.67■□□□□ 0.42
Col1a2Q01149 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Col1a2Q01149 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col1a2Q01149 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col1a2Q01149 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col1a2Q01149 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.67■□□□□ 0.42
Col1a2Q01149 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.66■□□□□ 0.42
Col1a2Q01149 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.66■□□□□ 0.42
Col1a2Q01149 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Col1a2Q01149 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Col1a2Q01149 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Col1a2Q01149 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Col1a2Q01149 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Gm14127-201ENSMUST00000117906 678 ntBASIC17.66■□□□□ 0.42
Col1a2Q01149 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.66■□□□□ 0.42
Col1a2Q01149 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col1a2Q01149 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col1a2Q01149 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col1a2Q01149 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col1a2Q01149 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.65■□□□□ 0.42
Col1a2Q01149 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.65■□□□□ 0.42
Col1a2Q01149 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col1a2Q01149 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Col1a2Q01149 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.65■□□□□ 0.42
Col1a2Q01149 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col1a2Q01149 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col1a2Q01149 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col1a2Q01149 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col1a2Q01149 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.65■□□□□ 0.42
Col1a2Q01149 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col1a2Q01149 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col1a2Q01149 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col1a2Q01149 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.65■□□□□ 0.42
Col1a2Q01149 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Col1a2Q01149 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col1a2Q01149 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col1a2Q01149 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col1a2Q01149 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col1a2Q01149 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Col1a2Q01149 Mir698-201ENSMUST00000102164 109 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms