Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nkx3-2P97503 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx3-2P97503 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx3-2P97503 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nkx3-2P97503 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx3-2P97503 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx3-2P97503 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.46□□□□□ -0.25
Nkx3-2P97503 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx3-2P97503 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx3-2P97503 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx3-2P97503 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nkx3-2P97503 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nkx3-2P97503 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx3-2P97503 Gm12151-201ENSMUST00000121374 290 ntBASIC13.46□□□□□ -0.25
Nkx3-2P97503 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx3-2P97503 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Nkx3-2P97503 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.46□□□□□ -0.25
Nkx3-2P97503 Gm37230-201ENSMUST00000194491 818 ntBASIC13.46□□□□□ -0.25
Nkx3-2P97503 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.46□□□□□ -0.25
Nkx3-2P97503 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.46□□□□□ -0.25
Nkx3-2P97503 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.46□□□□□ -0.25
Nkx3-2P97503 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Nkx3-2P97503 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.46□□□□□ -0.25
Nkx3-2P97503 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
Nkx3-2P97503 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx3-2P97503 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Nkx3-2P97503 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx3-2P97503 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.26
Nkx3-2P97503 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx3-2P97503 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx3-2P97503 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx3-2P97503 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx3-2P97503 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.46□□□□□ -0.26
Nkx3-2P97503 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx3-2P97503 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Gm12428-201ENSMUST00000119844 727 ntBASIC13.45□□□□□ -0.26
Nkx3-2P97503 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Gm16476-201ENSMUST00000221544 139 ntBASIC13.45□□□□□ -0.26
Nkx3-2P97503 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.45□□□□□ -0.26
Nkx3-2P97503 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx3-2P97503 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.44□□□□□ -0.26
Nkx3-2P97503 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.44□□□□□ -0.26
Nkx3-2P97503 Gm6222-201ENSMUST00000120787 396 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms