Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.95□□□□□ -0.5
Npas1P97459 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.95□□□□□ -0.5
Npas1P97459 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Npas1P97459 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Npas1P97459 Gm12895-201ENSMUST00000122214 226 ntBASIC11.95□□□□□ -0.5
Npas1P97459 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.95□□□□□ -0.5
Npas1P97459 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Npas1P97459 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.95□□□□□ -0.5
Npas1P97459 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Npas1P97459 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Npas1P97459 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Npas1P97459 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.94□□□□□ -0.5
Npas1P97459 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Npas1P97459 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Gm11780-201ENSMUST00000136880 516 ntBASIC11.94□□□□□ -0.5
Npas1P97459 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.94□□□□□ -0.5
Npas1P97459 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.94□□□□□ -0.5
Npas1P97459 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.94□□□□□ -0.5
Npas1P97459 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.94□□□□□ -0.5
Npas1P97459 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Npas1P97459 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Npas1P97459 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.94□□□□□ -0.5
Npas1P97459 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Npas1P97459 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
Npas1P97459 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Npas1P97459 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Npas1P97459 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Npas1P97459 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.93□□□□□ -0.5
Npas1P97459 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.93□□□□□ -0.5
Npas1P97459 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.93□□□□□ -0.5
Npas1P97459 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Gm12644-201ENSMUST00000119935 606 ntBASIC11.93□□□□□ -0.5
Npas1P97459 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Npas1P97459 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms