Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
H3f3aP84244 Gm15957-201ENSMUST00000118893 974 ntBASIC12.67□□□□□ -0.38
H3f3aP84244 Gm15920-201ENSMUST00000118998 402 ntBASIC12.67□□□□□ -0.38
H3f3aP84244 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.67□□□□□ -0.38
H3f3aP84244 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.67□□□□□ -0.38
H3f3aP84244 Gm27618-201ENSMUST00000183671 60 ntBASIC12.67□□□□□ -0.38
H3f3aP84244 Gm27533-201ENSMUST00000183800 152 ntBASIC12.67□□□□□ -0.38
H3f3aP84244 Dupd1-202ENSMUST00000224735 548 ntBASIC12.67□□□□□ -0.38
H3f3aP84244 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.67□□□□□ -0.38
H3f3aP84244 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.67□□□□□ -0.38
H3f3aP84244 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.67□□□□□ -0.38
H3f3aP84244 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.67□□□□□ -0.38
H3f3aP84244 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.67□□□□□ -0.38
H3f3aP84244 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
H3f3aP84244 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3aP84244 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.67□□□□□ -0.38
H3f3aP84244 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.67□□□□□ -0.38
H3f3aP84244 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
H3f3aP84244 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3aP84244 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3aP84244 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3aP84244 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3aP84244 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3aP84244 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3aP84244 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
H3f3aP84244 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3aP84244 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
H3f3aP84244 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3aP84244 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
H3f3aP84244 Gm8410-201ENSMUST00000117225 605 ntBASIC12.66□□□□□ -0.38
H3f3aP84244 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.66□□□□□ -0.38
H3f3aP84244 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.66□□□□□ -0.38
H3f3aP84244 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.66□□□□□ -0.38
H3f3aP84244 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.66□□□□□ -0.38
H3f3aP84244 Gm44608-201ENSMUST00000206827 855 ntBASIC12.66□□□□□ -0.38
H3f3aP84244 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.66□□□□□ -0.38
H3f3aP84244 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
H3f3aP84244 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3aP84244 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3aP84244 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3aP84244 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3aP84244 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
H3f3aP84244 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3aP84244 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.66□□□□□ -0.38
H3f3aP84244 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
H3f3aP84244 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
H3f3aP84244 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3aP84244 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
H3f3aP84244 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
H3f3aP84244 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
H3f3aP84244 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
H3f3aP84244 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
H3f3aP84244 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.65□□□□□ -0.38
H3f3aP84244 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
H3f3aP84244 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.65□□□□□ -0.38
H3f3aP84244 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.65□□□□□ -0.38
H3f3aP84244 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.65□□□□□ -0.38
H3f3aP84244 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.65□□□□□ -0.38
H3f3aP84244 Shd-206ENSMUST00000225145 998 ntBASIC12.65□□□□□ -0.38
H3f3aP84244 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.65□□□□□ -0.38
H3f3aP84244 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
H3f3aP84244 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.65□□□□□ -0.38
H3f3aP84244 Mir125a-201ENSMUST00000083545 68 ntBASIC12.65□□□□□ -0.38
H3f3aP84244 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
H3f3aP84244 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms