Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lsm6P62313 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lsm6P62313 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.49□□□□□ -0.41
Lsm6P62313 Gm8584-201ENSMUST00000171982 758 ntBASIC12.49□□□□□ -0.41
Lsm6P62313 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Lsm6P62313 Gm24513-201ENSMUST00000174964 138 ntBASIC12.49□□□□□ -0.41
Lsm6P62313 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.49□□□□□ -0.41
Lsm6P62313 Gm9824-201ENSMUST00000178707 561 ntBASIC12.49□□□□□ -0.41
Lsm6P62313 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Gm27397-201ENSMUST00000184997 107 ntBASIC12.49□□□□□ -0.41
Lsm6P62313 Gm44608-201ENSMUST00000206827 855 ntBASIC12.49□□□□□ -0.41
Lsm6P62313 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.49□□□□□ -0.41
Lsm6P62313 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lsm6P62313 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lsm6P62313 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lsm6P62313 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.48□□□□□ -0.41
Lsm6P62313 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Lsm6P62313 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lsm6P62313 Gm15957-201ENSMUST00000118893 974 ntBASIC12.48□□□□□ -0.41
Lsm6P62313 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.48□□□□□ -0.41
Lsm6P62313 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.48□□□□□ -0.41
Lsm6P62313 AA619741-201ENSMUST00000195095 646 ntBASIC12.48□□□□□ -0.41
Lsm6P62313 Gm2213-201ENSMUST00000197485 688 ntBASIC12.48□□□□□ -0.41
Lsm6P62313 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Lsm6P62313 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.48□□□□□ -0.41
Lsm6P62313 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.48□□□□□ -0.41
Lsm6P62313 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Lsm6P62313 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm6P62313 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm6P62313 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.47□□□□□ -0.41
Lsm6P62313 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.47□□□□□ -0.41
Lsm6P62313 Gm11594-201ENSMUST00000122313 162 ntBASIC12.47□□□□□ -0.41
Lsm6P62313 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.47□□□□□ -0.41
Lsm6P62313 Gm43125-201ENSMUST00000201724 730 ntBASIC12.47□□□□□ -0.41
Lsm6P62313 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Lsm6P62313 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.47□□□□□ -0.41
Lsm6P62313 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Lsm6P62313 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.47□□□□□ -0.41
Lsm6P62313 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lsm6P62313 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lsm6P62313 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.47□□□□□ -0.41
Lsm6P62313 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm6P62313 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm6P62313 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.46□□□□□ -0.41
Lsm6P62313 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.46□□□□□ -0.41
Lsm6P62313 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms