Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cks1bP61025 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.18□□□□□ -0.78
Cks1bP61025 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Cks1bP61025 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Cks1bP61025 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.18□□□□□ -0.78
Cks1bP61025 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cks1bP61025 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Cks1bP61025 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Cks1bP61025 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Cks1bP61025 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Cks1bP61025 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC10.17□□□□□ -0.78
Cks1bP61025 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Gm8349-201ENSMUST00000182720 1003 ntBASIC10.17□□□□□ -0.78
Cks1bP61025 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Cks1bP61025 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.17□□□□□ -0.78
Cks1bP61025 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.17□□□□□ -0.78
Cks1bP61025 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.17□□□□□ -0.78
Cks1bP61025 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Cks1bP61025 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.17□□□□□ -0.78
Cks1bP61025 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Cks1bP61025 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1bP61025 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Cks1bP61025 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Cks1bP61025 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Cks1bP61025 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Cks1bP61025 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC10.16□□□□□ -0.78
Cks1bP61025 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.16□□□□□ -0.78
Cks1bP61025 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC10.16□□□□□ -0.78
Cks1bP61025 Gm17808-201ENSMUST00000200859 894 ntBASIC10.16□□□□□ -0.78
Cks1bP61025 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.16□□□□□ -0.78
Cks1bP61025 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cks1bP61025 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cks1bP61025 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms