Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nphp4P59240 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nphp4P59240 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nphp4P59240 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nphp4P59240 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC19.07■□□□□ 0.64
Nphp4P59240 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Nphp4P59240 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nphp4P59240 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nphp4P59240 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nphp4P59240 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC19.07■□□□□ 0.64
Nphp4P59240 Gm4984-201ENSMUST00000115987 360 ntBASIC19.07■□□□□ 0.64
Nphp4P59240 Gm5069-202ENSMUST00000192714 1011 ntBASIC19.07■□□□□ 0.64
Nphp4P59240 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nphp4P59240 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC19.07■□□□□ 0.64
Nphp4P59240 Gm18473-201ENSMUST00000220543 868 ntBASIC19.07■□□□□ 0.64
Nphp4P59240 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nphp4P59240 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC19.07■□□□□ 0.64
Nphp4P59240 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nphp4P59240 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nphp4P59240 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC19.06■□□□□ 0.64
Nphp4P59240 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nphp4P59240 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nphp4P59240 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nphp4P59240 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nphp4P59240 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nphp4P59240 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nphp4P59240 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nphp4P59240 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nphp4P59240 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nphp4P59240 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nphp4P59240 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nphp4P59240 Gm11814-201ENSMUST00000119515 929 ntBASIC19.06■□□□□ 0.64
Nphp4P59240 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nphp4P59240 Gm8652-201ENSMUST00000181363 964 ntBASIC19.06■□□□□ 0.64
Nphp4P59240 Gm37297-201ENSMUST00000192974 2384 ntBASIC19.05■□□□□ 0.64
Nphp4P59240 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nphp4P59240 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Nphp4P59240 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Nphp4P59240 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nphp4P59240 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Nphp4P59240 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nphp4P59240 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC19.05■□□□□ 0.64
Nphp4P59240 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC19.05■□□□□ 0.64
Nphp4P59240 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nphp4P59240 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Nphp4P59240 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC19.05■□□□□ 0.64
Nphp4P59240 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nphp4P59240 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nphp4P59240 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nphp4P59240 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Nphp4P59240 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nphp4P59240 Gm9816-201ENSMUST00000122292 1414 ntBASIC19.05■□□□□ 0.64
Nphp4P59240 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nphp4P59240 AC114008.2-201ENSMUST00000227699 1347 ntBASIC19.04■□□□□ 0.64
Nphp4P59240 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Gm15371-201ENSMUST00000117057 784 ntBASIC19.04■□□□□ 0.64
Nphp4P59240 Gm15824-201ENSMUST00000119516 955 ntBASIC19.04■□□□□ 0.64
Nphp4P59240 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Gm10012-201ENSMUST00000078252 192 ntBASIC19.04■□□□□ 0.64
Nphp4P59240 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC19.04■□□□□ 0.64
Nphp4P59240 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Nphp4P59240 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Nphp4P59240 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nphp4P59240 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Nphp4P59240 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nphp4P59240 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nphp4P59240 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nphp4P59240 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nphp4P59240 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nphp4P59240 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC19.03■□□□□ 0.64
Nphp4P59240 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nphp4P59240 Gm29608-201ENSMUST00000190444 463 ntBASIC19.03■□□□□ 0.64
Nphp4P59240 Gm44799-201ENSMUST00000207639 1202 ntBASIC19.03■□□□□ 0.64
Nphp4P59240 Gm7561-201ENSMUST00000211203 886 ntBASIC19.03■□□□□ 0.64
Nphp4P59240 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nphp4P59240 AC131997.1-201ENSMUST00000228611 1229 ntBASIC19.03■□□□□ 0.64
Nphp4P59240 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nphp4P59240 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nphp4P59240 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nphp4P59240 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nphp4P59240 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms