Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nub1P54729 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nub1P54729 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nub1P54729 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nub1P54729 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nub1P54729 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.32■□□□□ 0.04
Nub1P54729 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.32■□□□□ 0.04
Nub1P54729 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nub1P54729 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nub1P54729 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nub1P54729 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nub1P54729 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.32■□□□□ 0.04
Nub1P54729 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nub1P54729 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nub1P54729 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nub1P54729 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nub1P54729 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nub1P54729 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.31■□□□□ 0.04
Nub1P54729 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nub1P54729 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.31■□□□□ 0.04
Nub1P54729 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.31■□□□□ 0.04
Nub1P54729 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nub1P54729 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.31■□□□□ 0.04
Nub1P54729 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nub1P54729 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nub1P54729 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.31■□□□□ 0.04
Nub1P54729 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nub1P54729 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nub1P54729 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nub1P54729 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nub1P54729 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nub1P54729 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nub1P54729 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nub1P54729 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nub1P54729 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.31■□□□□ 0.04
Nub1P54729 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.31■□□□□ 0.04
Nub1P54729 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nub1P54729 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nub1P54729 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nub1P54729 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Nub1P54729 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nub1P54729 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.3■□□□□ 0.04
Nub1P54729 Gm5566-201ENSMUST00000116118 459 ntBASIC15.3■□□□□ 0.04
Nub1P54729 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
Nub1P54729 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Gm13616-201ENSMUST00000120600 222 ntBASIC15.3■□□□□ 0.04
Nub1P54729 Gm6222-201ENSMUST00000120787 396 ntBASIC15.3■□□□□ 0.04
Nub1P54729 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.3■□□□□ 0.04
Nub1P54729 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.3■□□□□ 0.04
Nub1P54729 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.3■□□□□ 0.04
Nub1P54729 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Nub1P54729 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nub1P54729 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nub1P54729 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nub1P54729 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.29■□□□□ 0.04
Nub1P54729 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.29■□□□□ 0.04
Nub1P54729 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Nub1P54729 Gm9719-201ENSMUST00000162765 543 ntBASIC15.29■□□□□ 0.04
Nub1P54729 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Gm27631-201ENSMUST00000184163 466 ntBASIC15.29■□□□□ 0.04
Nub1P54729 Gm28630-201ENSMUST00000187806 498 ntBASIC15.29■□□□□ 0.04
Nub1P54729 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.29■□□□□ 0.04
Nub1P54729 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.29■□□□□ 0.04
Nub1P54729 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.29■□□□□ 0.04
Nub1P54729 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.29■□□□□ 0.04
Nub1P54729 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nub1P54729 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms