Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ercc3P49135 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.88■□□□□ 0.29
Ercc3P49135 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.88■□□□□ 0.29
Ercc3P49135 Gm12134-201ENSMUST00000122109 520 ntBASIC16.88■□□□□ 0.29
Ercc3P49135 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Ercc3P49135 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.88■□□□□ 0.29
Ercc3P49135 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.88■□□□□ 0.29
Ercc3P49135 Gm45453-201ENSMUST00000211758 853 ntBASIC16.88■□□□□ 0.29
Ercc3P49135 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.88■□□□□ 0.29
Ercc3P49135 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ercc3P49135 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.88■□□□□ 0.29
Ercc3P49135 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Ercc3P49135 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.88■□□□□ 0.29
Ercc3P49135 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.88■□□□□ 0.29
Ercc3P49135 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Ercc3P49135 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ercc3P49135 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ercc3P49135 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.87■□□□□ 0.29
Ercc3P49135 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ercc3P49135 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ercc3P49135 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Gm14042-201ENSMUST00000120139 833 ntBASIC16.87■□□□□ 0.29
Ercc3P49135 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Ercc3P49135 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Gm44872-201ENSMUST00000207864 420 ntBASIC16.87■□□□□ 0.29
Ercc3P49135 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.87■□□□□ 0.29
Ercc3P49135 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ercc3P49135 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.87■□□□□ 0.29
Ercc3P49135 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ercc3P49135 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ercc3P49135 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms