Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
GdnfP48540 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.47□□□□□ -0.41
GdnfP48540 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.47□□□□□ -0.41
GdnfP48540 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.47□□□□□ -0.41
GdnfP48540 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.47□□□□□ -0.41
GdnfP48540 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.47□□□□□ -0.41
GdnfP48540 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
GdnfP48540 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
GdnfP48540 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
GdnfP48540 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.47□□□□□ -0.41
GdnfP48540 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
GdnfP48540 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GdnfP48540 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.47□□□□□ -0.41
GdnfP48540 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
GdnfP48540 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.47□□□□□ -0.41
GdnfP48540 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
GdnfP48540 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.46□□□□□ -0.41
GdnfP48540 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
GdnfP48540 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
GdnfP48540 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
GdnfP48540 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.46□□□□□ -0.41
GdnfP48540 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
GdnfP48540 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
GdnfP48540 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.46□□□□□ -0.41
GdnfP48540 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.46□□□□□ -0.41
GdnfP48540 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.46□□□□□ -0.41
GdnfP48540 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.46□□□□□ -0.41
GdnfP48540 Gm18206-201ENSMUST00000207027 926 ntBASIC12.46□□□□□ -0.41
GdnfP48540 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
GdnfP48540 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.46□□□□□ -0.41
GdnfP48540 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
GdnfP48540 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.46□□□□□ -0.41
GdnfP48540 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GdnfP48540 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
GdnfP48540 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.46□□□□□ -0.42
GdnfP48540 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GdnfP48540 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.42
GdnfP48540 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
GdnfP48540 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
GdnfP48540 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
GdnfP48540 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
GdnfP48540 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
GdnfP48540 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
GdnfP48540 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GdnfP48540 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.46□□□□□ -0.42
GdnfP48540 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
GdnfP48540 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GdnfP48540 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
GdnfP48540 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
GdnfP48540 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.45□□□□□ -0.42
GdnfP48540 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
GdnfP48540 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.45□□□□□ -0.42
GdnfP48540 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
GdnfP48540 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms