Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox2P48432 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox2P48432 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Sox2P48432 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.35□□□□□ -0.27
Sox2P48432 Gm27459-201ENSMUST00000184860 107 ntBASIC13.35□□□□□ -0.27
Sox2P48432 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox2P48432 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sox2P48432 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox2P48432 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox2P48432 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox2P48432 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sox2P48432 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox2P48432 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox2P48432 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox2P48432 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox2P48432 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sox2P48432 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox2P48432 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox2P48432 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox2P48432 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.34□□□□□ -0.27
Sox2P48432 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.34□□□□□ -0.27
Sox2P48432 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.34□□□□□ -0.27
Sox2P48432 Birc2-201ENSMUST00000054878 378 ntBASIC13.34□□□□□ -0.27
Sox2P48432 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Sox2P48432 Rps4l-201ENSMUST00000071745 943 ntBASIC13.34□□□□□ -0.27
Sox2P48432 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Sox2P48432 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Sox2P48432 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox2P48432 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox2P48432 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox2P48432 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.33□□□□□ -0.27
Sox2P48432 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox2P48432 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Sox2P48432 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.33□□□□□ -0.28
Sox2P48432 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.33□□□□□ -0.28
Sox2P48432 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.33□□□□□ -0.28
Sox2P48432 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.33□□□□□ -0.28
Sox2P48432 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sox2P48432 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sox2P48432 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.33□□□□□ -0.28
Sox2P48432 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox2P48432 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.32□□□□□ -0.28
Sox2P48432 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox2P48432 Gm7153-201ENSMUST00000117092 455 ntBASIC13.32□□□□□ -0.28
Sox2P48432 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox2P48432 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.32□□□□□ -0.28
Sox2P48432 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.32□□□□□ -0.28
Sox2P48432 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.32□□□□□ -0.28
Sox2P48432 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sox2P48432 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sox2P48432 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sox2P48432 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.32□□□□□ -0.28
Sox2P48432 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms