Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.04□□□□□ -0.32
Nkx2-2P42586 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Gm27622-201ENSMUST00000183779 60 ntBASIC13.04□□□□□ -0.32
Nkx2-2P42586 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.04□□□□□ -0.32
Nkx2-2P42586 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-2P42586 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Gm8410-201ENSMUST00000117225 605 ntBASIC13.03□□□□□ -0.32
Nkx2-2P42586 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.03□□□□□ -0.32
Nkx2-2P42586 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Gm25144-201ENSMUST00000179561 110 ntBASIC13.03□□□□□ -0.32
Nkx2-2P42586 Gm25352-201ENSMUST00000179815 110 ntBASIC13.03□□□□□ -0.32
Nkx2-2P42586 Gm27430-201ENSMUST00000184585 107 ntBASIC13.03□□□□□ -0.32
Nkx2-2P42586 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Gm44333-201ENSMUST00000197168 107 ntBASIC13.03□□□□□ -0.32
Nkx2-2P42586 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.03□□□□□ -0.32
Nkx2-2P42586 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Nkx2-2P42586 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.03□□□□□ -0.32
Nkx2-2P42586 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-2P42586 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-2P42586 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.02□□□□□ -0.32
Nkx2-2P42586 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-2P42586 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-2P42586 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-2P42586 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-2P42586 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-2P42586 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nkx2-2P42586 Gm27533-201ENSMUST00000183800 152 ntBASIC13.02□□□□□ -0.33
Nkx2-2P42586 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms