Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-2P42580 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-2P42580 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx1-2P42580 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Gm6973-201ENSMUST00000117080 721 ntBASIC17.48■□□□□ 0.39
Nkx1-2P42580 Gm11779-201ENSMUST00000118541 368 ntBASIC17.48■□□□□ 0.39
Nkx1-2P42580 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Mir3113-201ENSMUST00000175478 76 ntBASIC17.48■□□□□ 0.39
Nkx1-2P42580 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.48■□□□□ 0.39
Nkx1-2P42580 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx1-2P42580 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.47■□□□□ 0.39
Nkx1-2P42580 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Nkx1-2P42580 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-2P42580 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Nkx1-2P42580 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-2P42580 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-2P42580 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-2P42580 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-2P42580 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-2P42580 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-2P42580 Gm10275-202ENSMUST00000168697 495 ntBASIC17.47■□□□□ 0.39
Nkx1-2P42580 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.47■□□□□ 0.39
Nkx1-2P42580 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-2P42580 Gm10275-201ENSMUST00000092620 635 ntBASIC17.47■□□□□ 0.39
Nkx1-2P42580 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-2P42580 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-2P42580 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-2P42580 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-2P42580 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx1-2P42580 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.47■□□□□ 0.39
Nkx1-2P42580 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Gm18206-201ENSMUST00000207027 926 ntBASIC17.46■□□□□ 0.39
Nkx1-2P42580 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Gm10305-201ENSMUST00000195331 2475 ntBASIC17.46■□□□□ 0.39
Nkx1-2P42580 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.46■□□□□ 0.39
Nkx1-2P42580 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx1-2P42580 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
Nkx1-2P42580 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.46■□□□□ 0.38
Nkx1-2P42580 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.45■□□□□ 0.38
Nkx1-2P42580 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.45■□□□□ 0.38
Nkx1-2P42580 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.45■□□□□ 0.38
Nkx1-2P42580 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Gm10175-201ENSMUST00000086013 645 ntBASIC17.45■□□□□ 0.38
Nkx1-2P42580 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.45■□□□□ 0.38
Nkx1-2P42580 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx1-2P42580 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms