Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Abca1P41233 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Abca1P41233 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.85□□□□□ -0.51
Abca1P41233 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Abca1P41233 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.85□□□□□ -0.51
Abca1P41233 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.85□□□□□ -0.51
Abca1P41233 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.85□□□□□ -0.51
Abca1P41233 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.85□□□□□ -0.51
Abca1P41233 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.85□□□□□ -0.51
Abca1P41233 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Abca1P41233 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Abca1P41233 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.85□□□□□ -0.51
Abca1P41233 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.84□□□□□ -0.51
Abca1P41233 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.84□□□□□ -0.51
Abca1P41233 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.84□□□□□ -0.51
Abca1P41233 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.84□□□□□ -0.51
Abca1P41233 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.84□□□□□ -0.51
Abca1P41233 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Abca1P41233 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.84□□□□□ -0.51
Abca1P41233 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.84□□□□□ -0.51
Abca1P41233 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.84□□□□□ -0.51
Abca1P41233 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Abca1P41233 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Abca1P41233 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Abca1P41233 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Abca1P41233 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Abca1P41233 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.83□□□□□ -0.52
Abca1P41233 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Abca1P41233 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Abca1P41233 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Abca1P41233 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.83□□□□□ -0.52
Abca1P41233 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.83□□□□□ -0.52
Abca1P41233 Mir1897-201ENSMUST00000122581 272 ntBASIC11.83□□□□□ -0.52
Abca1P41233 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.83□□□□□ -0.52
Abca1P41233 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Abca1P41233 Gm28760-201ENSMUST00000185995 736 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms