Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col18a1P39061 Gm25214-201ENSMUST00000104573 129 ntBASIC18.47■□□□□ 0.55
Col18a1P39061 Gm16202-201ENSMUST00000117532 544 ntBASIC18.47■□□□□ 0.55
Col18a1P39061 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC18.47■□□□□ 0.55
Col18a1P39061 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC18.47■□□□□ 0.55
Col18a1P39061 Gm8546-201ENSMUST00000178288 1264 ntBASIC18.47■□□□□ 0.55
Col18a1P39061 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col18a1P39061 Gm19208-201ENSMUST00000213861 912 ntBASIC18.47■□□□□ 0.55
Col18a1P39061 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col18a1P39061 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col18a1P39061 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC18.47■□□□□ 0.55
Col18a1P39061 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col18a1P39061 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Col18a1P39061 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col18a1P39061 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col18a1P39061 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col18a1P39061 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col18a1P39061 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.46■□□□□ 0.55
Col18a1P39061 Gm8805-201ENSMUST00000117848 313 ntBASIC18.46■□□□□ 0.55
Col18a1P39061 Gm14277-201ENSMUST00000121195 360 ntBASIC18.46■□□□□ 0.55
Col18a1P39061 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC18.46■□□□□ 0.55
Col18a1P39061 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col18a1P39061 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col18a1P39061 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col18a1P39061 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC18.46■□□□□ 0.55
Col18a1P39061 Gm44069-201ENSMUST00000204898 506 ntBASIC18.46■□□□□ 0.55
Col18a1P39061 Gm18212-201ENSMUST00000211678 889 ntBASIC18.46■□□□□ 0.55
Col18a1P39061 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC18.46■□□□□ 0.55
Col18a1P39061 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC18.46■□□□□ 0.55
Col18a1P39061 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col18a1P39061 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col18a1P39061 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col18a1P39061 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col18a1P39061 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col18a1P39061 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col18a1P39061 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Col18a1P39061 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Col18a1P39061 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col18a1P39061 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Col18a1P39061 Gm23200-201ENSMUST00000104379 132 ntBASIC18.45■□□□□ 0.54
Col18a1P39061 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col18a1P39061 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col18a1P39061 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC18.45■□□□□ 0.54
Col18a1P39061 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC18.45■□□□□ 0.54
Col18a1P39061 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Col18a1P39061 Gm20632-201ENSMUST00000176760 2427 ntBASIC18.45■□□□□ 0.54
Col18a1P39061 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col18a1P39061 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col18a1P39061 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col18a1P39061 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col18a1P39061 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col18a1P39061 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col18a1P39061 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC18.45■□□□□ 0.54
Col18a1P39061 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col18a1P39061 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col18a1P39061 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col18a1P39061 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC18.45■□□□□ 0.54
Col18a1P39061 AU022133-201ENSMUST00000200601 873 ntBASIC18.45■□□□□ 0.54
Col18a1P39061 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col18a1P39061 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Col18a1P39061 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col18a1P39061 AC139054.1-201ENSMUST00000226898 1598 ntBASIC18.44■□□□□ 0.54
Col18a1P39061 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col18a1P39061 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.44■□□□□ 0.54
Col18a1P39061 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col18a1P39061 Gm23270-201ENSMUST00000104055 131 ntBASIC18.44■□□□□ 0.54
Col18a1P39061 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col18a1P39061 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC18.44■□□□□ 0.54
Col18a1P39061 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC18.44■□□□□ 0.54
Col18a1P39061 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC18.44■□□□□ 0.54
Col18a1P39061 Gm18584-201ENSMUST00000203098 964 ntBASIC18.44■□□□□ 0.54
Col18a1P39061 Gm4768-201ENSMUST00000206199 686 ntBASIC18.44■□□□□ 0.54
Col18a1P39061 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC18.44■□□□□ 0.54
Col18a1P39061 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col18a1P39061 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col18a1P39061 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col18a1P39061 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC18.44■□□□□ 0.54
Col18a1P39061 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col18a1P39061 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col18a1P39061 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col18a1P39061 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Col18a1P39061 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col18a1P39061 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col18a1P39061 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC18.44■□□□□ 0.54
Col18a1P39061 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col18a1P39061 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col18a1P39061 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Col18a1P39061 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col18a1P39061 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Col18a1P39061 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Col18a1P39061 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col18a1P39061 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col18a1P39061 Gstp-ps-201ENSMUST00000195526 631 ntBASIC18.43■□□□□ 0.54
Col18a1P39061 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC18.43■□□□□ 0.54
Col18a1P39061 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col18a1P39061 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC18.43■□□□□ 0.54
Col18a1P39061 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col18a1P39061 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col18a1P39061 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Col18a1P39061 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms