Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15□□□□□ -0.01
Rfc1P35601 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc1P35601 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Rfc1P35601 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfc1P35601 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc1P35601 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc1P35601 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc1P35601 Gm7114-201ENSMUST00000190159 1789 ntBASIC15□□□□□ -0.01
Rfc1P35601 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfc1P35601 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Rfc1P35601 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc1P35601 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfc1P35601 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfc1P35601 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc1P35601 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15□□□□□ -0.01
Rfc1P35601 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc1P35601 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Rfc1P35601 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Rfc1P35601 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.99□□□□□ -0.01
Rfc1P35601 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rfc1P35601 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.99□□□□□ -0.01
Rfc1P35601 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.99□□□□□ -0.01
Rfc1P35601 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.99□□□□□ -0.01
Rfc1P35601 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.99□□□□□ -0.01
Rfc1P35601 Gm13418-201ENSMUST00000119097 944 ntBASIC14.99□□□□□ -0.01
Rfc1P35601 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.99□□□□□ -0.01
Rfc1P35601 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.99□□□□□ -0.01
Rfc1P35601 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.99□□□□□ -0.01
Rfc1P35601 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rfc1P35601 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rfc1P35601 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
Rfc1P35601 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.99□□□□□ -0.01
Rfc1P35601 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rfc1P35601 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfc1P35601 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.98□□□□□ -0.01
Rfc1P35601 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.98□□□□□ -0.01
Rfc1P35601 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rfc1P35601 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rfc1P35601 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rfc1P35601 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.98□□□□□ -0.01
Rfc1P35601 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Gm24589-201ENSMUST00000116692 94 ntBASIC14.98□□□□□ -0.01
Rfc1P35601 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rfc1P35601 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.98□□□□□ -0.01
Rfc1P35601 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.98□□□□□ -0.01
Rfc1P35601 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rfc1P35601 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Rfc1P35601 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rfc1P35601 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rfc1P35601 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfc1P35601 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.98□□□□□ -0.01
Rfc1P35601 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.97□□□□□ -0.01
Rfc1P35601 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Rfc1P35601 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.97□□□□□ -0.01
Rfc1P35601 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.97□□□□□ -0.01
Rfc1P35601 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.97□□□□□ -0.01
Rfc1P35601 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Gm17971-201ENSMUST00000190239 806 ntBASIC14.97□□□□□ -0.01
Rfc1P35601 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms