Protein–RNA interactions for Protein: P33622

Apoc3, Apolipoprotein C-III, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc3P33622 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.04□□□□□ -0.48
Apoc3P33622 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Apoc3P33622 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Apoc3P33622 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Apoc3P33622 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Apoc3P33622 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.03□□□□□ -0.48
Apoc3P33622 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Apoc3P33622 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.03□□□□□ -0.48
Apoc3P33622 Mir5133-201ENSMUST00000174955 77 ntBASIC12.03□□□□□ -0.48
Apoc3P33622 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.03□□□□□ -0.48
Apoc3P33622 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
Apoc3P33622 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Apoc3P33622 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.03□□□□□ -0.48
Apoc3P33622 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Apoc3P33622 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Apoc3P33622 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Apoc3P33622 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Apoc3P33622 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Apoc3P33622 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Apoc3P33622 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Apoc3P33622 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Apoc3P33622 Gm18666-201ENSMUST00000190039 958 ntBASIC12.02□□□□□ -0.49
Apoc3P33622 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.02□□□□□ -0.49
Apoc3P33622 Gm42642-201ENSMUST00000200683 355 ntBASIC12.02□□□□□ -0.49
Apoc3P33622 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.02□□□□□ -0.49
Apoc3P33622 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Apoc3P33622 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.02□□□□□ -0.49
Apoc3P33622 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Apoc3P33622 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Apoc3P33622 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Apoc3P33622 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Apoc3P33622 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Apoc3P33622 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.01□□□□□ -0.49
Apoc3P33622 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.01□□□□□ -0.49
Apoc3P33622 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Apoc3P33622 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Apoc3P33622 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Apoc3P33622 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Apoc3P33622 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Apoc3P33622 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.01□□□□□ -0.49
Apoc3P33622 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Apoc3P33622 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Apoc3P33622 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Apoc3P33622 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.01□□□□□ -0.49
Apoc3P33622 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Apoc3P33622 Matn2-203ENSMUST00000226766 3252 ntBASIC12.01□□□□□ -0.49
Apoc3P33622 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms