Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a11P31650 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Slc6a11P31650 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a11P31650 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a11P31650 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a11P31650 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.52□□□□□ -0.25
Slc6a11P31650 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a11P31650 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a11P31650 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a11P31650 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a11P31650 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a11P31650 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a11P31650 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
Slc6a11P31650 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.51□□□□□ -0.25
Slc6a11P31650 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Slc6a11P31650 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.51□□□□□ -0.25
Slc6a11P31650 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Slc6a11P31650 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.51□□□□□ -0.25
Slc6a11P31650 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.51□□□□□ -0.25
Slc6a11P31650 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Slc6a11P31650 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Slc6a11P31650 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.51□□□□□ -0.25
Slc6a11P31650 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.51□□□□□ -0.25
Slc6a11P31650 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.51□□□□□ -0.25
Slc6a11P31650 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.51□□□□□ -0.25
Slc6a11P31650 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.51□□□□□ -0.25
Slc6a11P31650 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Slc6a11P31650 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a11P31650 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.51□□□□□ -0.25
Slc6a11P31650 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Slc6a11P31650 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Slc6a11P31650 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.5□□□□□ -0.25
Slc6a11P31650 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.5□□□□□ -0.25
Slc6a11P31650 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Gm13365-201ENSMUST00000121188 973 ntBASIC13.5□□□□□ -0.25
Slc6a11P31650 Rprl2-201ENSMUST00000157150 290 ntBASIC13.5□□□□□ -0.25
Slc6a11P31650 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Slc6a11P31650 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Slc6a11P31650 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Slc6a11P31650 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Slc6a11P31650 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slc6a11P31650 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a11P31650 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a11P31650 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a11P31650 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Slc6a11P31650 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a11P31650 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a11P31650 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Slc6a11P31650 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a11P31650 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms