Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Syt7-205ENSMUST00000224135 1557 ntBASIC11.88□□□□□ -0.51
Col8a2P25318 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Col8a2P25318 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col8a2P25318 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col8a2P25318 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col8a2P25318 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.87□□□□□ -0.51
Col8a2P25318 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col8a2P25318 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Mir7684-201ENSMUST00000183858 60 ntBASIC11.87□□□□□ -0.51
Col8a2P25318 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col8a2P25318 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col8a2P25318 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.87□□□□□ -0.51
Col8a2P25318 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.87□□□□□ -0.51
Col8a2P25318 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col8a2P25318 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col8a2P25318 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col8a2P25318 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.87□□□□□ -0.51
Col8a2P25318 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col8a2P25318 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.86□□□□□ -0.51
Col8a2P25318 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.86□□□□□ -0.51
Col8a2P25318 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Col8a2P25318 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.86□□□□□ -0.51
Col8a2P25318 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.86□□□□□ -0.51
Col8a2P25318 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Col8a2P25318 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Col8a2P25318 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Col8a2P25318 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Col8a2P25318 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.86□□□□□ -0.51
Col8a2P25318 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col8a2P25318 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Col8a2P25318 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.86□□□□□ -0.51
Col8a2P25318 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms