Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pde6bP23440 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pde6bP23440 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Pde6bP23440 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Pde6bP23440 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.54■□□□□ 0.08
Pde6bP23440 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.54■□□□□ 0.08
Pde6bP23440 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Gm9522-201ENSMUST00000182394 926 ntBASIC15.54■□□□□ 0.08
Pde6bP23440 AA619741-201ENSMUST00000195095 646 ntBASIC15.54■□□□□ 0.08
Pde6bP23440 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.54■□□□□ 0.08
Pde6bP23440 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.54■□□□□ 0.08
Pde6bP23440 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.54■□□□□ 0.08
Pde6bP23440 Mir125a-201ENSMUST00000083545 68 ntBASIC15.54■□□□□ 0.08
Pde6bP23440 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pde6bP23440 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Pde6bP23440 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.54■□□□□ 0.08
Pde6bP23440 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6bP23440 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pde6bP23440 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.53■□□□□ 0.08
Pde6bP23440 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Pde6bP23440 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pde6bP23440 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Gm42612-201ENSMUST00000197986 623 ntBASIC15.53■□□□□ 0.08
Pde6bP23440 Gm43170-201ENSMUST00000199827 612 ntBASIC15.53■□□□□ 0.08
Pde6bP23440 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.53■□□□□ 0.08
Pde6bP23440 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pde6bP23440 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pde6bP23440 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6bP23440 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pde6bP23440 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6bP23440 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6bP23440 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pde6bP23440 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6bP23440 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Pde6bP23440 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6bP23440 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6bP23440 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6bP23440 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6bP23440 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.52■□□□□ 0.08
Pde6bP23440 Gm8515-201ENSMUST00000194852 576 ntBASIC15.52■□□□□ 0.08
Pde6bP23440 Gm43438-201ENSMUST00000198133 379 ntBASIC15.52■□□□□ 0.08
Pde6bP23440 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.52■□□□□ 0.08
Pde6bP23440 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6bP23440 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.52■□□□□ 0.08
Pde6bP23440 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pde6bP23440 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6bP23440 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pde6bP23440 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pde6bP23440 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pde6bP23440 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.52■□□□□ 0.07
Pde6bP23440 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pde6bP23440 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pde6bP23440 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pde6bP23440 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.52■□□□□ 0.07
Pde6bP23440 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pde6bP23440 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6bP23440 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pde6bP23440 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pde6bP23440 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6bP23440 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pde6bP23440 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6bP23440 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pde6bP23440 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pde6bP23440 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.51■□□□□ 0.07
Pde6bP23440 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6bP23440 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6bP23440 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6bP23440 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6bP23440 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6bP23440 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6bP23440 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6bP23440 Gm22189-201ENSMUST00000103822 86 ntBASIC15.51■□□□□ 0.07
Pde6bP23440 Gm14127-201ENSMUST00000117906 678 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms