Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgn1P18608 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgn1P18608 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgn1P18608 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.02□□□□□ -0.32
Hmgn1P18608 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.02□□□□□ -0.32
Hmgn1P18608 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgn1P18608 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.02□□□□□ -0.32
Hmgn1P18608 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgn1P18608 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.02□□□□□ -0.32
Hmgn1P18608 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgn1P18608 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Hmgn1P18608 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgn1P18608 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgn1P18608 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hmgn1P18608 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmgn1P18608 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.02□□□□□ -0.33
Hmgn1P18608 Gm5479-201ENSMUST00000160578 435 ntBASIC13.02□□□□□ -0.33
Hmgn1P18608 Gm27300-201ENSMUST00000184085 97 ntBASIC13.02□□□□□ -0.33
Hmgn1P18608 Gm27335-201ENSMUST00000184758 97 ntBASIC13.02□□□□□ -0.33
Hmgn1P18608 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmgn1P18608 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.02□□□□□ -0.33
Hmgn1P18608 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.02□□□□□ -0.33
Hmgn1P18608 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.02□□□□□ -0.33
Hmgn1P18608 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.02□□□□□ -0.33
Hmgn1P18608 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hmgn1P18608 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmgn1P18608 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hmgn1P18608 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmgn1P18608 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Hmgn1P18608 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hmgn1P18608 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmgn1P18608 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmgn1P18608 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.02□□□□□ -0.33
Hmgn1P18608 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.02□□□□□ -0.33
Hmgn1P18608 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hmgn1P18608 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmgn1P18608 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmgn1P18608 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmgn1P18608 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.01□□□□□ -0.33
Hmgn1P18608 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Hmgn1P18608 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Gm13036-201ENSMUST00000117799 748 ntBASIC13.01□□□□□ -0.33
Hmgn1P18608 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.01□□□□□ -0.33
Hmgn1P18608 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.01□□□□□ -0.33
Hmgn1P18608 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hmgn1P18608 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hmgn1P18608 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Hmgn1P18608 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.01□□□□□ -0.33
Hmgn1P18608 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmgn1P18608 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hmgn1P18608 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13□□□□□ -0.33
Hmgn1P18608 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Hmgn1P18608 Gm16198-201ENSMUST00000118766 670 ntBASIC13□□□□□ -0.33
Hmgn1P18608 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13□□□□□ -0.33
Hmgn1P18608 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hmgn1P18608 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13□□□□□ -0.33
Hmgn1P18608 Ank2-226ENSMUST00000189368 339 ntBASIC13□□□□□ -0.33
Hmgn1P18608 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms