Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NclP09405 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
NclP09405 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NclP09405 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NclP09405 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC21.07■□□□□ 0.96
NclP09405 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NclP09405 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NclP09405 Gm31326-201ENSMUST00000191856 1048 ntBASIC21.07■□□□□ 0.96
NclP09405 AC155729.1-201ENSMUST00000227758 544 ntBASIC21.07■□□□□ 0.96
NclP09405 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NclP09405 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NclP09405 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
NclP09405 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NclP09405 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NclP09405 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
NclP09405 Gm10676-201ENSMUST00000098778 3221 ntBASIC21.07■□□□□ 0.96
NclP09405 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NclP09405 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NclP09405 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NclP09405 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NclP09405 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NclP09405 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
NclP09405 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NclP09405 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC21.06■□□□□ 0.96
NclP09405 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC21.06■□□□□ 0.96
NclP09405 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC21.06■□□□□ 0.96
NclP09405 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC21.06■□□□□ 0.96
NclP09405 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC21.06■□□□□ 0.96
NclP09405 AC154239.3-201ENSMUST00000226933 674 ntBASIC21.06■□□□□ 0.96
NclP09405 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC21.06■□□□□ 0.96
NclP09405 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC21.06■□□□□ 0.96
NclP09405 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NclP09405 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NclP09405 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NclP09405 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NclP09405 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NclP09405 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NclP09405 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC21.05■□□□□ 0.96
NclP09405 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NclP09405 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NclP09405 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC21.05■□□□□ 0.96
NclP09405 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NclP09405 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NclP09405 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NclP09405 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NclP09405 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NclP09405 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
NclP09405 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NclP09405 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NclP09405 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NclP09405 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NclP09405 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NclP09405 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NclP09405 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NclP09405 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NclP09405 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NclP09405 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NclP09405 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NclP09405 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NclP09405 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC21.04■□□□□ 0.96
NclP09405 Gm21470-201ENSMUST00000187680 696 ntBASIC21.04■□□□□ 0.96
NclP09405 AC102291.3-201ENSMUST00000226566 405 ntBASIC21.04■□□□□ 0.96
NclP09405 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NclP09405 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NclP09405 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NclP09405 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NclP09405 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NclP09405 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NclP09405 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
NclP09405 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NclP09405 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC21.04■□□□□ 0.96
NclP09405 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
NclP09405 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NclP09405 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NclP09405 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NclP09405 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NclP09405 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NclP09405 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NclP09405 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NclP09405 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
NclP09405 Gm12490-201ENSMUST00000120255 560 ntBASIC21.03■□□□□ 0.96
NclP09405 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms