Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.99□□□□□ -0.33
Col4a2P08122 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col4a2P08122 Gm22018-201ENSMUST00000104357 131 ntBASIC12.99□□□□□ -0.33
Col4a2P08122 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col4a2P08122 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Col4a2P08122 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col4a2P08122 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Col4a2P08122 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.99□□□□□ -0.33
Col4a2P08122 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.99□□□□□ -0.33
Col4a2P08122 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col4a2P08122 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.99□□□□□ -0.33
Col4a2P08122 Mir8109-201ENSMUST00000184375 117 ntBASIC12.99□□□□□ -0.33
Col4a2P08122 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.99□□□□□ -0.33
Col4a2P08122 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col4a2P08122 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a2P08122 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Col4a2P08122 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col4a2P08122 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col4a2P08122 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.98□□□□□ -0.33
Col4a2P08122 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Col4a2P08122 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.98□□□□□ -0.33
Col4a2P08122 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.98□□□□□ -0.33
Col4a2P08122 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.98□□□□□ -0.33
Col4a2P08122 Gm38223-201ENSMUST00000194484 695 ntBASIC12.98□□□□□ -0.33
Col4a2P08122 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.98□□□□□ -0.33
Col4a2P08122 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.98□□□□□ -0.33
Col4a2P08122 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.98□□□□□ -0.33
Col4a2P08122 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.98□□□□□ -0.33
Col4a2P08122 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col4a2P08122 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Col4a2P08122 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a2P08122 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.97□□□□□ -0.33
Col4a2P08122 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.97□□□□□ -0.33
Col4a2P08122 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.97□□□□□ -0.33
Col4a2P08122 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Gm22331-201ENSMUST00000158066 136 ntBASIC12.97□□□□□ -0.33
Col4a2P08122 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Gm8810-201ENSMUST00000172895 754 ntBASIC12.97□□□□□ -0.33
Col4a2P08122 Gm44397-201ENSMUST00000195950 113 ntBASIC12.97□□□□□ -0.33
Col4a2P08122 Gm19184-201ENSMUST00000196798 928 ntBASIC12.97□□□□□ -0.33
Col4a2P08122 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.97□□□□□ -0.33
Col4a2P08122 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col4a2P08122 Gm7399-201ENSMUST00000032395 858 ntBASIC12.97□□□□□ -0.33
Col4a2P08122 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.97□□□□□ -0.33
Col4a2P08122 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a2P08122 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.97□□□□□ -0.33
Col4a2P08122 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.97□□□□□ -0.33
Col4a2P08122 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.97□□□□□ -0.33
Col4a2P08122 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Col4a2P08122 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms