Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa4P06798 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa4P06798 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa4P06798 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa4P06798 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa4P06798 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa4P06798 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa4P06798 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hoxa4P06798 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.97□□□□□ -0.17
Hoxa4P06798 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.97□□□□□ -0.17
Hoxa4P06798 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Hoxa4P06798 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hoxa4P06798 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.97□□□□□ -0.17
Hoxa4P06798 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.97□□□□□ -0.17
Hoxa4P06798 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Hoxa4P06798 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa4P06798 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hoxa4P06798 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hoxa4P06798 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.97□□□□□ -0.17
Hoxa4P06798 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hoxa4P06798 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.96□□□□□ -0.17
Hoxa4P06798 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.96□□□□□ -0.17
Hoxa4P06798 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa4P06798 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa4P06798 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa4P06798 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Hoxa4P06798 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa4P06798 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Hoxa4P06798 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa4P06798 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa4P06798 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.96□□□□□ -0.17
Hoxa4P06798 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa4P06798 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa4P06798 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.96□□□□□ -0.17
Hoxa4P06798 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.96□□□□□ -0.17
Hoxa4P06798 Gm24694-201ENSMUST00000180054 110 ntBASIC13.96□□□□□ -0.17
Hoxa4P06798 Gm27663-201ENSMUST00000184839 110 ntBASIC13.96□□□□□ -0.17
Hoxa4P06798 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Hoxa4P06798 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Hoxa4P06798 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.96□□□□□ -0.17
Hoxa4P06798 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa4P06798 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.96□□□□□ -0.17
Hoxa4P06798 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Hoxa4P06798 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa4P06798 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa4P06798 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxa4P06798 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxa4P06798 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Hoxa4P06798 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxa4P06798 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxa4P06798 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.96□□□□□ -0.18
Hoxa4P06798 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Hoxa4P06798 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxa4P06798 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxa4P06798 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Hoxa4P06798 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.95□□□□□ -0.18
Hoxa4P06798 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Hoxa4P06798 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Hoxa4P06798 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.95□□□□□ -0.18
Hoxa4P06798 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Hoxa4P06798 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Hoxa4P06798 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.95□□□□□ -0.18
Hoxa4P06798 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.95□□□□□ -0.18
Hoxa4P06798 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Hoxa4P06798 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Hoxa4P06798 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms