Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Hoxa3P02831 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Hoxa3P02831 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Hoxa3P02831 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa3P02831 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.95□□□□□ -0.5
Hoxa3P02831 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.95□□□□□ -0.5
Hoxa3P02831 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.95□□□□□ -0.5
Hoxa3P02831 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Hoxa3P02831 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Hoxa3P02831 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hoxa3P02831 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.94□□□□□ -0.5
Hoxa3P02831 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.94□□□□□ -0.5
Hoxa3P02831 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Hoxa3P02831 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Hoxa3P02831 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.94□□□□□ -0.5
Hoxa3P02831 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.94□□□□□ -0.5
Hoxa3P02831 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.94□□□□□ -0.5
Hoxa3P02831 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.94□□□□□ -0.5
Hoxa3P02831 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Hoxa3P02831 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Hoxa3P02831 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Hoxa3P02831 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.94□□□□□ -0.5
Hoxa3P02831 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hoxa3P02831 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hoxa3P02831 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa3P02831 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hoxa3P02831 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.93□□□□□ -0.5
Hoxa3P02831 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Hoxa3P02831 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Hoxa3P02831 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.93□□□□□ -0.5
Hoxa3P02831 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hoxa3P02831 Gm24543-201ENSMUST00000103867 82 ntBASIC11.93□□□□□ -0.5
Hoxa3P02831 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hoxa3P02831 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.93□□□□□ -0.5
Hoxa3P02831 Gm14767-201ENSMUST00000121559 586 ntBASIC11.93□□□□□ -0.5
Hoxa3P02831 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Gm15487-201ENSMUST00000122373 465 ntBASIC11.93□□□□□ -0.5
Hoxa3P02831 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.93□□□□□ -0.5
Hoxa3P02831 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Hoxa3P02831 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Gm9726-201ENSMUST00000180321 678 ntBASIC11.93□□□□□ -0.5
Hoxa3P02831 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Gm27437-201ENSMUST00000183429 107 ntBASIC11.93□□□□□ -0.5
Hoxa3P02831 Mir8102-201ENSMUST00000184148 139 ntBASIC11.93□□□□□ -0.5
Hoxa3P02831 Mir6977-201ENSMUST00000184960 64 ntBASIC11.93□□□□□ -0.5
Hoxa3P02831 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.93□□□□□ -0.5
Hoxa3P02831 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Hoxa3P02831 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.93□□□□□ -0.5
Hoxa3P02831 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hoxa3P02831 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Hoxa3P02831 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa3P02831 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Hoxa3P02831 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Hoxa3P02831 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hoxa3P02831 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms