Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Gm8349-201ENSMUST00000182720 1003 ntBASIC9.99□□□□□ -0.81
Hbb-b1P02088 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hbb-b1P02088 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Hbb-b1P02088 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Gm43463-201ENSMUST00000195967 1803 ntBASIC9.98□□□□□ -0.81
Hbb-b1P02088 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Gm18101-201ENSMUST00000215769 548 ntBASIC9.98□□□□□ -0.81
Hbb-b1P02088 Gm20049-201ENSMUST00000219950 730 ntBASIC9.98□□□□□ -0.81
Hbb-b1P02088 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Hbb-b1P02088 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Gm10698-201ENSMUST00000182663 604 ntBASIC9.97□□□□□ -0.81
Hbb-b1P02088 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 AC130713.1-201ENSMUST00000228853 1096 ntBASIC9.97□□□□□ -0.81
Hbb-b1P02088 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms