Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
P01852 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
P01852 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
P01852 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.03□□□□□ -0.32
P01852 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
P01852 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
P01852 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01852 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
P01852 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01852 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
P01852 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01852 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01852 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01852 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01852 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01852 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01852 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01852 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01852 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01852 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
P01852 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01852 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
P01852 Gm5566-201ENSMUST00000116118 459 ntBASIC13.02□□□□□ -0.33
P01852 Gm6222-201ENSMUST00000120787 396 ntBASIC13.02□□□□□ -0.33
P01852 Gm9719-201ENSMUST00000162765 543 ntBASIC13.02□□□□□ -0.33
P01852 Gm10275-202ENSMUST00000168697 495 ntBASIC13.02□□□□□ -0.33
P01852 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01852 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.02□□□□□ -0.33
P01852 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
P01852 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
P01852 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.02□□□□□ -0.33
P01852 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.02□□□□□ -0.33
P01852 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.02□□□□□ -0.33
P01852 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01852 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01852 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
P01852 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01852 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01852 Gm10275-201ENSMUST00000092620 635 ntBASIC13.02□□□□□ -0.33
P01852 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01852 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01852 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
P01852 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.02□□□□□ -0.33
P01852 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
P01852 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.02□□□□□ -0.33
P01852 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01852 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
P01852 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
P01852 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.02□□□□□ -0.33
P01852 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01852 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01852 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01852 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
P01852 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01852 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01852 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
P01852 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.01□□□□□ -0.33
P01852 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.01□□□□□ -0.33
P01852 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.01□□□□□ -0.33
P01852 AA543401-201ENSMUST00000164248 1269 ntBASIC13.01□□□□□ -0.33
P01852 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Gm28630-201ENSMUST00000187806 498 ntBASIC13.01□□□□□ -0.33
P01852 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.01□□□□□ -0.33
P01852 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01852 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms