Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cops4O88544 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cops4O88544 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.13□□□□□ -0.31
Cops4O88544 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cops4O88544 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cops4O88544 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cops4O88544 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Cops4O88544 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.13□□□□□ -0.31
Cops4O88544 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.13□□□□□ -0.31
Cops4O88544 Grk6-205ENSMUST00000224653 2976 ntBASIC13.13□□□□□ -0.31
Cops4O88544 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cops4O88544 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.13□□□□□ -0.31
Cops4O88544 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.13□□□□□ -0.31
Cops4O88544 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cops4O88544 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.13□□□□□ -0.31
Cops4O88544 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Mir8098-201ENSMUST00000184011 137 ntBASIC13.13□□□□□ -0.31
Cops4O88544 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cops4O88544 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.13□□□□□ -0.31
Cops4O88544 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.13□□□□□ -0.31
Cops4O88544 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.13□□□□□ -0.31
Cops4O88544 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.13□□□□□ -0.31
Cops4O88544 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
Cops4O88544 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cops4O88544 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops4O88544 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cops4O88544 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cops4O88544 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Gm11764-201ENSMUST00000120221 623 ntBASIC13.12□□□□□ -0.31
Cops4O88544 Gm7862-201ENSMUST00000121461 292 ntBASIC13.12□□□□□ -0.31
Cops4O88544 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.12□□□□□ -0.31
Cops4O88544 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.12□□□□□ -0.31
Cops4O88544 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.12□□□□□ -0.31
Cops4O88544 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops4O88544 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cops4O88544 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms