Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nid2O88322 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC18.25■□□□□ 0.51
Nid2O88322 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC18.25■□□□□ 0.51
Nid2O88322 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC18.25■□□□□ 0.51
Nid2O88322 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Nid2O88322 Gm3809-201ENSMUST00000180973 1006 ntBASIC18.25■□□□□ 0.51
Nid2O88322 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Nid2O88322 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Gm4857-201ENSMUST00000192718 785 ntBASIC18.25■□□□□ 0.51
Nid2O88322 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.25■□□□□ 0.51
Nid2O88322 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Nid2O88322 AC159747.1-201ENSMUST00000219903 265 ntBASIC18.25■□□□□ 0.51
Nid2O88322 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC18.25■□□□□ 0.51
Nid2O88322 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nid2O88322 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Nid2O88322 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Nid2O88322 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC18.24■□□□□ 0.51
Nid2O88322 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC18.24■□□□□ 0.51
Nid2O88322 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Gm37008-201ENSMUST00000195712 319 ntBASIC18.24■□□□□ 0.51
Nid2O88322 Gm42929-201ENSMUST00000198374 1286 ntBASIC18.24■□□□□ 0.51
Nid2O88322 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC18.24■□□□□ 0.51
Nid2O88322 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.24■□□□□ 0.51
Nid2O88322 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.24■□□□□ 0.51
Nid2O88322 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nid2O88322 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nid2O88322 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nid2O88322 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC18.23■□□□□ 0.51
Nid2O88322 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC18.23■□□□□ 0.51
Nid2O88322 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC18.23■□□□□ 0.51
Nid2O88322 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nid2O88322 Cts7-204ENSMUST00000225321 1257 ntBASIC18.23■□□□□ 0.51
Nid2O88322 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nid2O88322 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nid2O88322 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Nid2O88322 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Mir698-201ENSMUST00000102164 109 ntBASIC18.23■□□□□ 0.51
Nid2O88322 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nid2O88322 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC18.23■□□□□ 0.51
Nid2O88322 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC18.23■□□□□ 0.51
Nid2O88322 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC18.23■□□□□ 0.51
Nid2O88322 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC18.23■□□□□ 0.51
Nid2O88322 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nid2O88322 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nid2O88322 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nid2O88322 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.22■□□□□ 0.51
Nid2O88322 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nid2O88322 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nid2O88322 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nid2O88322 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nid2O88322 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nid2O88322 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms