Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.37□□□□□ -0.11
Chrna4O70174 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Chrna4O70174 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.37□□□□□ -0.11
Chrna4O70174 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.37□□□□□ -0.11
Chrna4O70174 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.37□□□□□ -0.11
Chrna4O70174 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chrna4O70174 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.37□□□□□ -0.11
Chrna4O70174 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna4O70174 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.37□□□□□ -0.11
Chrna4O70174 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.36□□□□□ -0.11
Chrna4O70174 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.36□□□□□ -0.11
Chrna4O70174 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
Chrna4O70174 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chrna4O70174 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.36□□□□□ -0.11
Chrna4O70174 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 Gm9719-201ENSMUST00000162765 543 ntBASIC14.36□□□□□ -0.11
Chrna4O70174 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.36□□□□□ -0.11
Chrna4O70174 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.36□□□□□ -0.11
Chrna4O70174 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chrna4O70174 Gm45453-201ENSMUST00000211758 853 ntBASIC14.36□□□□□ -0.11
Chrna4O70174 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.36□□□□□ -0.11
Chrna4O70174 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
Chrna4O70174 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chrna4O70174 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Chrna4O70174 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 BC001981-202ENSMUST00000191393 1545 ntBASIC14.36□□□□□ -0.11
Chrna4O70174 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna4O70174 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.35□□□□□ -0.11
Chrna4O70174 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.35□□□□□ -0.11
Chrna4O70174 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chrna4O70174 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Chrna4O70174 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.35□□□□□ -0.11
Chrna4O70174 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chrna4O70174 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chrna4O70174 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Gm5566-201ENSMUST00000116118 459 ntBASIC14.35□□□□□ -0.11
Chrna4O70174 Gm6415-201ENSMUST00000118488 348 ntBASIC14.35□□□□□ -0.11
Chrna4O70174 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.35□□□□□ -0.11
Chrna4O70174 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.35□□□□□ -0.11
Chrna4O70174 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chrna4O70174 Gm8584-201ENSMUST00000171982 758 ntBASIC14.35□□□□□ -0.11
Chrna4O70174 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.35□□□□□ -0.11
Chrna4O70174 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.35□□□□□ -0.11
Chrna4O70174 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.35□□□□□ -0.11
Chrna4O70174 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.35□□□□□ -0.11
Chrna4O70174 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna4O70174 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Chrna4O70174 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chrna4O70174 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Gm25948-201ENSMUST00000175334 112 ntBASIC14.34□□□□□ -0.11
Chrna4O70174 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna4O70174 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms