Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp8O70138 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp8O70138 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp8O70138 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Mmp8O70138 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp8O70138 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp8O70138 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp8O70138 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp8O70138 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.32■□□□□ 0.36
Mmp8O70138 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp8O70138 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Mmp8O70138 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp8O70138 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp8O70138 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Mmp8O70138 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp8O70138 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp8O70138 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp8O70138 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp8O70138 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Mmp8O70138 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp8O70138 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.32■□□□□ 0.36
Mmp8O70138 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp8O70138 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.31■□□□□ 0.36
Mmp8O70138 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.31■□□□□ 0.36
Mmp8O70138 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Mmp8O70138 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.31■□□□□ 0.36
Mmp8O70138 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Mmp8O70138 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Mmp8O70138 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Mmp8O70138 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Mmp8O70138 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp8O70138 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.3■□□□□ 0.36
Mmp8O70138 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Mmp8O70138 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Gm4875-201ENSMUST00000118257 786 ntBASIC17.3■□□□□ 0.36
Mmp8O70138 Gm12151-201ENSMUST00000121374 290 ntBASIC17.3■□□□□ 0.36
Mmp8O70138 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.3■□□□□ 0.36
Mmp8O70138 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.3■□□□□ 0.36
Mmp8O70138 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Mmp8O70138 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.3■□□□□ 0.36
Mmp8O70138 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Mmp8O70138 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Mmp8O70138 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Mmp8O70138 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.3■□□□□ 0.36
Mmp8O70138 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Mmp8O70138 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Mmp8O70138 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp8O70138 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Mmp8O70138 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp8O70138 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Mmp8O70138 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp8O70138 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp8O70138 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp8O70138 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp8O70138 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp8O70138 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.29■□□□□ 0.36
Mmp8O70138 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp8O70138 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp8O70138 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms