Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Gm22171-201ENSMUST00000179283 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Gm23936-201ENSMUST00000179354 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Gm22619-201ENSMUST00000179516 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Gm25255-201ENSMUST00000179579 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Gm24755-201ENSMUST00000179691 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Gm26506-201ENSMUST00000179692 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Gm25086-201ENSMUST00000179931 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Gm23243-201ENSMUST00000180047 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Gm24659-201ENSMUST00000180212 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Gm24169-201ENSMUST00000180244 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Gm23689-201ENSMUST00000180354 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Gm27359-201ENSMUST00000184153 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Gm27785-201ENSMUST00000184268 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Gm27466-201ENSMUST00000184396 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Gm27703-201ENSMUST00000184836 110 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atf6bO35451 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atf6bO35451 Gm45098-201ENSMUST00000207179 657 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.39□□□□□ -0.43
Atf6bO35451 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atf6bO35451 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atf6bO35451 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atf6bO35451 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atf6bO35451 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atf6bO35451 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atf6bO35451 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atf6bO35451 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atf6bO35451 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atf6bO35451 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atf6bO35451 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.39□□□□□ -0.43
Atf6bO35451 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Atf6bO35451 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.38□□□□□ -0.43
Atf6bO35451 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Atf6bO35451 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.38□□□□□ -0.43
Atf6bO35451 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.38□□□□□ -0.43
Atf6bO35451 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.38□□□□□ -0.43
Atf6bO35451 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.38□□□□□ -0.43
Atf6bO35451 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Atf6bO35451 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6bO35451 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.38□□□□□ -0.43
Atf6bO35451 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Atf6bO35451 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Atf6bO35451 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.37□□□□□ -0.43
Atf6bO35451 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Atf6bO35451 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Atf6bO35451 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.37□□□□□ -0.43
Atf6bO35451 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.37□□□□□ -0.43
Atf6bO35451 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Atf6bO35451 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.37□□□□□ -0.43
Atf6bO35451 Gm24158-201ENSMUST00000175263 71 ntBASIC12.37□□□□□ -0.43
Atf6bO35451 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.37□□□□□ -0.43
Atf6bO35451 Olfr286-202ENSMUST00000205305 969 ntBASIC12.37□□□□□ -0.43
Atf6bO35451 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.37□□□□□ -0.43
Atf6bO35451 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.37□□□□□ -0.43
Atf6bO35451 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.37□□□□□ -0.43
Atf6bO35451 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Atf6bO35451 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.37□□□□□ -0.43
Atf6bO35451 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Atf6bO35451 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Atf6bO35451 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Atf6bO35451 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6bO35451 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Atf6bO35451 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms