Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Gm8749-201ENSMUST00000117737 331 ntBASIC14.79□□□□□ -0.04
Ebf3O08791 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.79□□□□□ -0.04
Ebf3O08791 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.79□□□□□ -0.04
Ebf3O08791 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.79□□□□□ -0.04
Ebf3O08791 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.79□□□□□ -0.04
Ebf3O08791 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.79□□□□□ -0.04
Ebf3O08791 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.79□□□□□ -0.04
Ebf3O08791 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.79□□□□□ -0.04
Ebf3O08791 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Ebf3O08791 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.79□□□□□ -0.04
Ebf3O08791 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf3O08791 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.78□□□□□ -0.04
Ebf3O08791 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ebf3O08791 Gm23984-201ENSMUST00000157139 203 ntBASIC14.78□□□□□ -0.04
Ebf3O08791 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.78□□□□□ -0.04
Ebf3O08791 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Gm6745-201ENSMUST00000199216 526 ntBASIC14.78□□□□□ -0.04
Ebf3O08791 Gm9182-201ENSMUST00000217829 639 ntBASIC14.78□□□□□ -0.04
Ebf3O08791 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ebf3O08791 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Ebf3O08791 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf3O08791 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf3O08791 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf3O08791 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf3O08791 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf3O08791 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf3O08791 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf3O08791 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ebf3O08791 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.77□□□□□ -0.04
Ebf3O08791 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf3O08791 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ebf3O08791 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf3O08791 Gm9522-201ENSMUST00000182394 926 ntBASIC14.77□□□□□ -0.05
Ebf3O08791 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.77□□□□□ -0.05
Ebf3O08791 Gm42612-201ENSMUST00000197986 623 ntBASIC14.77□□□□□ -0.05
Ebf3O08791 Gm43170-201ENSMUST00000199827 612 ntBASIC14.77□□□□□ -0.05
Ebf3O08791 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.77□□□□□ -0.05
Ebf3O08791 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.77□□□□□ -0.05
Ebf3O08791 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf3O08791 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf3O08791 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf3O08791 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf3O08791 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ebf3O08791 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf3O08791 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf3O08791 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf3O08791 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf3O08791 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf3O08791 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.76□□□□□ -0.05
Ebf3O08791 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf3O08791 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf3O08791 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Ebf3O08791 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ebf3O08791 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Ebf3O08791 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.76□□□□□ -0.05
Ebf3O08791 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf3O08791 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf3O08791 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf3O08791 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms