Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
ScaperF8VQ70 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ScaperF8VQ70 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ScaperF8VQ70 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.02■□□□□ 0.47
ScaperF8VQ70 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
ScaperF8VQ70 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ScaperF8VQ70 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ScaperF8VQ70 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ScaperF8VQ70 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC18.02■□□□□ 0.47
ScaperF8VQ70 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
ScaperF8VQ70 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ScaperF8VQ70 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ScaperF8VQ70 Mir125a-201ENSMUST00000083545 68 ntBASIC18.02■□□□□ 0.47
ScaperF8VQ70 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ScaperF8VQ70 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ScaperF8VQ70 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
ScaperF8VQ70 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.01■□□□□ 0.47
ScaperF8VQ70 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ScaperF8VQ70 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ScaperF8VQ70 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ScaperF8VQ70 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ScaperF8VQ70 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ScaperF8VQ70 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.01■□□□□ 0.47
ScaperF8VQ70 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ScaperF8VQ70 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ScaperF8VQ70 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ScaperF8VQ70 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.01■□□□□ 0.47
ScaperF8VQ70 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC18.01■□□□□ 0.47
ScaperF8VQ70 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.01■□□□□ 0.47
ScaperF8VQ70 Gm5356-201ENSMUST00000093326 615 ntBASIC18.01■□□□□ 0.47
ScaperF8VQ70 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ScaperF8VQ70 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ScaperF8VQ70 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ScaperF8VQ70 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ScaperF8VQ70 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ScaperF8VQ70 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ScaperF8VQ70 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Gm5354-201ENSMUST00000182417 973 ntBASIC18■□□□□ 0.47
ScaperF8VQ70 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ScaperF8VQ70 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ScaperF8VQ70 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Gm12341-201ENSMUST00000119724 503 ntBASIC17.99■□□□□ 0.47
ScaperF8VQ70 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.99■□□□□ 0.47
ScaperF8VQ70 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.99■□□□□ 0.47
ScaperF8VQ70 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.99■□□□□ 0.47
ScaperF8VQ70 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
ScaperF8VQ70 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ScaperF8VQ70 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.98■□□□□ 0.47
ScaperF8VQ70 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.98■□□□□ 0.47
ScaperF8VQ70 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.98■□□□□ 0.47
ScaperF8VQ70 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.98■□□□□ 0.47
ScaperF8VQ70 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ScaperF8VQ70 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms