Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Gm12882-201ENSMUST00000121696 517 ntBASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh9F8VPK8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Gm20553-201ENSMUST00000204205 844 ntBASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh9F8VPK8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdh9F8VPK8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh9F8VPK8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms