Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Gm18041-201ENSMUST00000218210 618 ntBASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Gm10154-201ENSMUST00000084445 354 ntBASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdh1F7BJK1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Gm5479-201ENSMUST00000160578 435 ntBASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Mir5131-201ENSMUST00000175426 93 ntBASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Mzt1-203ENSMUST00000227948 952 ntBASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms