Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Gm27618-201ENSMUST00000183671 60 ntBASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Gm27533-201ENSMUST00000183800 152 ntBASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Shd-206ENSMUST00000225145 998 ntBASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4lE9Q2N0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Mir1897-201ENSMUST00000122581 272 ntBASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4lE9Q2N0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Gm8584-201ENSMUST00000171982 758 ntBASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Gm25144-201ENSMUST00000179561 110 ntBASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Gm25352-201ENSMUST00000179815 110 ntBASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Gm44608-201ENSMUST00000206827 855 ntBASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4lE9Q2N0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4lE9Q2N0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4lE9Q2N0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4lE9Q2N0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms