Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Col6a3E9PWQ3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Gm43916-201ENSMUST00000205062 967 ntBASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Gm10146-201ENSMUST00000072739 309 ntBASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Gm13045-201ENSMUST00000119019 712 ntBASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a3E9PWQ3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Gm17040-202ENSMUST00000170597 889 ntBASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Gm17391-201ENSMUST00000171036 126 ntBASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Gm19353-201ENSMUST00000184561 445 ntBASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Gm17330-201ENSMUST00000221047 165 ntBASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a3E9PWQ3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Ntng1-201ENSMUST00000051253 327 ntBASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms