Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.52□□□□□ -0.57
Nkx6-2D3Z4R4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Gm715-201ENSMUST00000117865 831 ntBASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Gm20760-201ENSMUST00000179197 648 ntBASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Mir1668-201ENSMUST00000184114 107 ntBASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-2D3Z4R4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Gm26039-201ENSMUST00000158152 144 ntBASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms