Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Ssr1-203ENSMUST00000225246 1825 ntBASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm9694-201ENSMUST00000193347 1189 ntBASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm42501-201ENSMUST00000200220 1026 ntBASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Gm3880A0A1B0GSB3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms