Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm27704-201ENSMUST00000185094 107 ntBASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm27357-201ENSMUST00000183754 135 ntBASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm27867-201ENSMUST00000184778 125 ntBASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms